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v1.4

Merged v1.4
dev into main
Merged Alexis Mergez requested to merge dev into main
  • Configured CI/CD to do a shallow test of the workflow (create the dag)
  • Updated README
  • Changed apptainer images to Pan1c-apps
  • Removed unused parameters in config.yaml
  • Added getApps.sh to download required images in the provided directory
  • Updated Snakefile and runSnakemake.sh to use new images

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