[illumina_QC][BWA] Do alignment on R1 and R2
On DNA data nature only (not on 10X, because R2 is index 1), it will be smarter to run bwa on the two reads in the same time.
Currently, each fastq file is mapped against the reference.
On DNA data nature only (not on 10X, because R2 is index 1), it will be smarter to run bwa on the two reads in the same time.
Currently, each fastq file is mapped against the reference.